Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN03080610_01009 | Not Available | Negative | 1068566 - 1069660 | 40208.8 |
| gntr family transcriptional regulator, phosphonate transport system regulatory protein | SAMN03080610_01010 | Not Available | Negative | 1069836 - 1070570 | 26563.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phng | SAMN03080610_01011 | Not Available | Positive | 1070676 - 1071188 | 18530.1 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh | SAMN03080610_01012 | Not Available | Positive | 1071188 - 1071787 | 20851.5 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | SAMN03080610_01013 | Not Available | Positive | 1071787 - 1072899 | 40679.2 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase | SAMN03080610_01014 | Not Available | Positive | 1073216 - 1074109 | 33059.2 |
| putative phosphonate transport system atp-binding protein | SAMN03080610_01015 | Not Available | Positive | 1074106 - 1074894 | 28524.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnl | SAMN03080610_01016 | Not Available | Positive | 1074898 - 1075602 | 24993.4 |
| hypothetical protein | SAMN03080610_01017 | Not Available | Positive | 1075599 - 1076222 | 22780.0 |
| phosphonate transport system atp-binding protein | SAMN03080610_01018 | Not Available | Positive | 1076356 - 1077234 | 31311.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
