Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/mannose transport system permease protein | SAMN03080610_00989 | Not Available | Positive | 1047573 - 1048457 | 32026.7 |
| multiple sugar transport system atp-binding protein | SAMN03080610_00990 | Not Available | Positive | 1048460 - 1049578 | 40756.1 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00991 | Not Available | Positive | 1049762 - 1050670 | 32318.7 |
| transcriptional regulator, iclr family | SAMN03080610_00992 | Not Available | Positive | 1050952 - 1051785 | 29097.9 |
| hypothetical protein | SAMN03080610_00993 | Not Available | Positive | 1051894 - 1052793 | 32596.8 |
| udp-glucose 4-epimerase | SAMN03080610_00994 | Not Available | Negative | 1052812 - 1053849 | 37307.4 |
| short-chain dehydrogenase | SAMN03080610_00995 | Not Available | Negative | 1054026 - 1055033 | 36639.2 |
| cytochrome c7 | SAMN03080610_00996 | Not Available | Positive | 1055343 - 1055996 | 24131.0 |
| prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit | SAMN03080610_00997 | Not Available | Positive | 1056158 - 1058980 | 102359.0 |
| prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit | SAMN03080610_00998 | Not Available | Positive | 1058977 - 1060386 | 53265.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
