Thiohalorhabdus denitrificans strain HL 19

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiohalorhabdales

Family

Thiohalorhabdaceae

Genus

Thiohalorhabdus

Description

Thiohalorhabdus denitrificans strain HL 19 is a Gram-negative, non-motile rod bacterium classified as a microaerophile, indicating its requirement for low levels of oxygen for growth. This strain thrives optimally at a temperature of 32°C, placing it within the mesophilic temperature range. The genomic characteristics of Thiohalorhabdus denitrificans HL 19 include a single replicon, which is relevant for understanding its genetic stability and replication processes. Notably, this strain does not form spores, which suggests that it relies on other survival strategies in challenging environmental conditions rather than sporulation. These physiological traits suggest that Thiohalorhabdus denitrificans HL 19 is adapted to specific ecological niches where microaerobic conditions prevail, such as in certain natural or engineered environments rich in sulfur compounds. Its denitrifying capabilities could play a significant role in biogeochemical cycles, particularly in environments where nitrate reduction is essential. Understanding its metabolic processes could contribute to bioremediation efforts or the management of nitrogen in agricultural systems. Overall, the unique adaptations of Thiohalorhabdus denitrificans HL 19 highlight its potential ecological importance in maintaining nitrogen balance and contributing to sulfur cycling in microaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiohalorhabdales
FamilyThiohalorhabdaceae
GenusThiohalorhabdus
SpeciesThiohalorhabdus denitrificans
Strainstrain HL 19

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature32
Temperature rangemesophilic
Habitathypersaline habitats
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiohalorhabdus denitrificans strain HL 19 genome assembly,

Gene Summary

Adenine Count

441900 bp

Thymine Count

454059 bp

Guanine Count

1011202 bp

Cytosine Count

969482 bp

Genome Length

2876643 bp

Protein-coding Genes

2694 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporter, cpa2 familySAMN05661077_2013Not AvailableNegative1941388 - 194303157743.9
choline/glycine/proline betaine transport proteinSAMN05661077_2014Not AvailablePositive1943163 - 194478858639.9
hypothetical proteinSAMN05661077_2015Not AvailableNegative1944984 - 194570626090.8
hypothetical proteinSAMN05661077_2016Not AvailableNegative1945697 - 194635324093.9
aaa atpase domain-containing proteinSAMN05661077_2017Not AvailableNegative1946363 - 194766148548.7
ribonucleoside-diphosphate reductase alpha chainSAMN05661077_2018Not AvailableNegative1947700 - 1950969121735.0
demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseSAMN05661077_2019Not AvailablePositive1951290 - 195206928918.6
2-octaprenylphenol hydroxylaseSAMN05661077_2020Not AvailablePositive1952085 - 195378564086.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05661077_2021Not AvailablePositive1953843 - 195544156720.8
hypothetical proteinSAMN05661077_2022Not AvailableNegative1955765 - 19560289452.35

Displaying genes 1821 – 1830 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.