Thiohalorhabdus denitrificans strain HL 19

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiohalorhabdales

Family

Thiohalorhabdaceae

Genus

Thiohalorhabdus

Description

Thiohalorhabdus denitrificans strain HL 19 is a Gram-negative, non-motile rod bacterium classified as a microaerophile, indicating its requirement for low levels of oxygen for growth. This strain thrives optimally at a temperature of 32°C, placing it within the mesophilic temperature range. The genomic characteristics of Thiohalorhabdus denitrificans HL 19 include a single replicon, which is relevant for understanding its genetic stability and replication processes. Notably, this strain does not form spores, which suggests that it relies on other survival strategies in challenging environmental conditions rather than sporulation. These physiological traits suggest that Thiohalorhabdus denitrificans HL 19 is adapted to specific ecological niches where microaerobic conditions prevail, such as in certain natural or engineered environments rich in sulfur compounds. Its denitrifying capabilities could play a significant role in biogeochemical cycles, particularly in environments where nitrate reduction is essential. Understanding its metabolic processes could contribute to bioremediation efforts or the management of nitrogen in agricultural systems. Overall, the unique adaptations of Thiohalorhabdus denitrificans HL 19 highlight its potential ecological importance in maintaining nitrogen balance and contributing to sulfur cycling in microaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiohalorhabdales
FamilyThiohalorhabdaceae
GenusThiohalorhabdus
SpeciesThiohalorhabdus denitrificans
Strainstrain HL 19

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature32
Temperature rangemesophilic
Habitathypersaline habitats
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiohalorhabdus denitrificans strain HL 19 genome assembly,

Gene Summary

Adenine Count

441900 bp

Thymine Count

454059 bp

Guanine Count

1011202 bp

Cytosine Count

969482 bp

Genome Length

2876643 bp

Protein-coding Genes

2694 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05661077_1354Not AvailablePositive1263491 - 126591488937.6
hypothetical proteinSAMN05661077_1355Not AvailableNegative1265947 - 126625511727.5
fanconi anemia group m proteinSAMN05661077_1356Not AvailableNegative1266381 - 126704024569.2
atp-binding cassette, subfamily f, member 3SAMN05661077_1357Not AvailableNegative1267143 - 126902669796.9
sulfoxide reductase catalytic subunit yedySAMN05661077_1358Not AvailableNegative1269072 - 127002236146.1
outer membrane lipoproteinSAMN05661077_1359Not AvailableNegative1270036 - 127053618013.6
outer membrane lipoproteinSAMN05661077_1360Not AvailableNegative1270542 - 127109321145.8
protein of unknown functionSAMN05661077_1361Not AvailableNegative1271266 - 127158912437.0
hypothetical proteinSAMN05661077_1362Not AvailablePositive1271714 - 127200711394.3
o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domainSAMN05661077_1363Not AvailablePositive1272058 - 127261819774.3

Displaying genes 1171 – 1180 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.