Micromonospora haikouensis strain DSM 45626

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora haikouensis strain DSM 45626 is a soil-dwelling bacterium characterized by the presence of flagella, which facilitates motility within its terrestrial habitat. This strain is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in its ecological niche. The strain has been cataloged under the accession number FMCW00000000.1, which serves as a reference point for researchers seeking to explore its genetic and phenotypic properties further. The presence of flagella is a significant trait, as it may enhance the bacterium's ability to navigate through soil environments, where nutrient and moisture gradients are critical for survival. In terms of ecological insight, Micromonospora species, including M. haikouensis, are known for their role in soil health and nutrient cycling. Their motility may play a crucial role in colonizing new areas of soil and interacting with other microorganisms, which is essential for maintaining microbial diversity and ecosystem function. Consequently, understanding the specific traits of M. haikouensis can provide valuable information on its ecological contributions and potential applications in soil management and bioremediation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora haikouensis
Strainstrain DSM 45626

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora haikouensis strain DSM 45626 genome assembly,

Gene Summary

Adenine Count

995401 bp

Thymine Count

990362 bp

Guanine Count

2788523 bp

Cytosine Count

2801045 bp

Genome Length

7581395 bp

Protein-coding Genes

6512 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidase catalytic domainGA0070558_11453Not AvailableNegative3569214 - 357048844508.3
right handed beta helix regionGA0070558_11454Not AvailableNegative3570686 - 357236559246.3
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)GA0070558_11455Not AvailableNegative3572642 - 357403947882.4
pyruvate dehydrogenase e1 component beta subunitGA0070558_11456Not AvailableNegative3574036 - 357505235991.1
pyruvate dehydrogenase e1 component alpha subunitGA0070558_11457Not AvailableNegative3575052 - 357624543342.9
transcriptional regulator, asnc familyGA0070558_11458Not AvailablePositive3576351 - 357685718447.8
dna ligase d, polymerase domain-containing proteinGA0070558_11459Not AvailableNegative3576865 - 357783636003.0
o-methyltransferase involved in polyketide biosynthesisGA0070558_11460Not AvailableNegative3577919 - 357874029547.1
hypothetical proteinGA0070558_11461Not AvailableNegative3578809 - 357913510891.8
hypothetical proteinGA0070558_11462Not AvailableNegative3579307 - 35795469445.35

Displaying genes 3201 – 3210 of 6569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.