Micromonospora carbonacea strain DSM 43168

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora carbonacea strain DSM 43168 is a soil-dwelling bacterium belonging to the genus Micromonospora. This strain is characterized by the presence of flagella, which enhance its motility within its terrestrial habitat. It possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in soil environments. The strain is cataloged under the accession number FMCT00000000.1, which serves as a reference for genetic and genomic studies. This information is crucial for researchers looking to explore the genetic makeup and functional capabilities of M. carbonacea. In terms of ecological significance, Micromonospora species, including M. carbonacea, are known for their role in soil ecosystems, particularly in the degradation of organic matter and the cycling of nutrients. Their ability to thrive in soil suggests that they may contribute to maintaining soil health and fertility. By participating in these processes, M. carbonacea could play a vital role in nutrient turnover and the overall functioning of terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora carbonacea
Strainstrain DSM 43168

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora carbonacea strain DSM 43168 genome assembly,

Gene Summary

Adenine Count

1035644 bp

Thymine Count

1042541 bp

Guanine Count

2929656 bp

Cytosine Count

2924591 bp

Genome Length

7941928 bp

Protein-coding Genes

6850 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3',5'-cyclic amp phosphodiesterase cpdaGA0070563_113117Not AvailablePositive5902484 - 590333231409.2
hemerythrin hhe cation binding domain-containing proteinGA0070563_113118Not AvailableNegative5903464 - 590396418980.5
ribosomal-protein-alanine n-acetyltransferaseGA0070563_113119Not AvailableNegative5904029 - 590453818179.5
yjef c-terminal region, hydroxyethylthiazole kinase-relatedGA0070563_113120Not AvailableNegative5905047 - 590591028931.6
broad specificity phosphatase phoeGA0070563_113121Not AvailableNegative5905894 - 590662526894.9
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsGA0070563_113122Not AvailableNegative5906679 - 590879674615.0
hypothetical proteinGA0070563_113123Not AvailablePositive5909046 - 590937210831.7
s-adenosyl methyltransferaseGA0070563_113124Not AvailablePositive5909441 - 591026229339.9
dna ligase d, polymerase domain-containing proteinGA0070563_113125Not AvailablePositive5910345 - 591131635925.0
transcriptional regulator, asnc familyGA0070563_113126Not AvailableNegative5911386 - 591189218387.8

Displaying genes 5331 – 5340 of 7014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.