Micromonospora carbonacea strain DSM 43168

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora carbonacea strain DSM 43168 is a soil-dwelling bacterium belonging to the genus Micromonospora. This strain is characterized by the presence of flagella, which enhance its motility within its terrestrial habitat. It possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in soil environments. The strain is cataloged under the accession number FMCT00000000.1, which serves as a reference for genetic and genomic studies. This information is crucial for researchers looking to explore the genetic makeup and functional capabilities of M. carbonacea. In terms of ecological significance, Micromonospora species, including M. carbonacea, are known for their role in soil ecosystems, particularly in the degradation of organic matter and the cycling of nutrients. Their ability to thrive in soil suggests that they may contribute to maintaining soil health and fertility. By participating in these processes, M. carbonacea could play a vital role in nutrient turnover and the overall functioning of terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora carbonacea
Strainstrain DSM 43168

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora carbonacea strain DSM 43168 genome assembly,

Gene Summary

Adenine Count

1035644 bp

Thymine Count

1042541 bp

Guanine Count

2929656 bp

Cytosine Count

2924591 bp

Genome Length

7941928 bp

Protein-coding Genes

6850 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine lyase/cysteine desulfuraseGA0070563_110249Not AvailablePositive5133022 - 513420642072.1
o-methyltransferaseGA0070563_110250Not AvailablePositive5134203 - 513522837690.2
ubiquinone/menaquinone biosynthesis c-methylase ubieGA0070563_110251Not AvailableNegative5135271 - 513626635757.5
predicted anti-sigma-ylac factor ylad, contains zn-finger domainGA0070563_110252Not AvailablePositive5136561 - 513737328918.0
rna polymerase sigma-70 factor, ecf subfamilyGA0070563_110253Not AvailableNegative5137396 - 513798320400.0
peptidase propeptide and ypeb domain-containing proteinGA0070563_110254Not AvailableNegative5138320 - 513884717692.7
signal transduction histidine kinaseGA0070563_110255Not AvailableNegative5138949 - 514022943812.9
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainGA0070563_110256Not AvailableNegative5140226 - 514091824950.2
hypothetical proteinGA0070563_110257Not AvailablePositive5141021 - 514152116341.2
right handed beta helix regionGA0070563_110258Not AvailablePositive5141763 - 514336755686.3

Displaying genes 4651 – 4660 of 7014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.