Micromonospora carbonacea strain DSM 43168

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora carbonacea strain DSM 43168 is a soil-dwelling bacterium belonging to the genus Micromonospora. This strain is characterized by the presence of flagella, which enhance its motility within its terrestrial habitat. It possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in soil environments. The strain is cataloged under the accession number FMCT00000000.1, which serves as a reference for genetic and genomic studies. This information is crucial for researchers looking to explore the genetic makeup and functional capabilities of M. carbonacea. In terms of ecological significance, Micromonospora species, including M. carbonacea, are known for their role in soil ecosystems, particularly in the degradation of organic matter and the cycling of nutrients. Their ability to thrive in soil suggests that they may contribute to maintaining soil health and fertility. By participating in these processes, M. carbonacea could play a vital role in nutrient turnover and the overall functioning of terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora carbonacea
Strainstrain DSM 43168

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora carbonacea strain DSM 43168 genome assembly,

Gene Summary

Adenine Count

1035644 bp

Thymine Count

1042541 bp

Guanine Count

2929656 bp

Cytosine Count

2924591 bp

Genome Length

7941928 bp

Protein-coding Genes

6850 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein cpafGA0070563_106444Not AvailableNegative3742018 - 374328343595.7
helicase/secretion neighborhood cpae-like proteinGA0070563_106445Not AvailableNegative3743280 - 374438637912.0
von hippel-lindau disease tumour suppressor proteinGA0070563_106446Not AvailablePositive3744741 - 374562531260.9
ricin-type beta-trefoil lectin domain-containing proteinGA0070563_106447Not AvailableNegative3745697 - 374624819097.7
glycosyl hydrolase family 10GA0070563_1071Not AvailableNegative3746249 - 374669715876.0
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)GA0070563_1072Not AvailableNegative3746976 - 374887768638.1
rna polymerase sigma factor, sigma-70 familyGA0070563_1073Not AvailableNegative3748864 - 374948723589.8
hypothetical proteinGA0070563_1074Not AvailableNegative3749484 - 374977710410.5
aaa-like domain-containing proteinGA0070563_1075Not AvailableNegative3749985 - 3753269116275.0
hypothetical proteinGA0070563_1076Not AvailableNegative3753269 - 375393723686.2

Displaying genes 3451 – 3460 of 7014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.