Chitinophaga costaii strain A37T2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga costaii strain A37T2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been documented to possess a single replicon, indicating a streamlined genomic structure. Its genomic data is available under the accession number FMAR00000000.1. In terms of its ecological role, Chitinophaga species, including C. costaii, are known to be involved in the decomposition of chitin, a major component of the exoskeletons of arthropods and the cell walls of fungi. This attribute highlights the potential significance of C. costaii in nutrient cycling within its environment, particularly in habitats rich in chitinous materials. Such decomposition processes contribute to soil health and the recycling of organic matter, which is critical for ecosystem functioning. Overall, the structural and genomic characteristics of Chitinophaga costaii strain A37T2 position it as a noteworthy organism within the microbial community, particularly in its role in chitin degradation and the associated ecological impacts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga costaii
Strainstrain A37T2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga costaii strain A37T2 genome assembly, contig:

Gene Summary

Adenine Count

1332907 bp

Thymine Count

1327935 bp

Guanine Count

1200286 bp

Cytosine Count

1213312 bp

Genome Length

5074440 bp

Protein-coding Genes

4204 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoisovalerate dehydrogenase e1 componentGA0116948_10287Not AvailablePositive873398 - 87540173462.4
hypothetical proteinGA0116948_10288Not AvailablePositive875493 - 8756395530.92
ost-hth/lotus domain-containing proteinGA0116948_10289Not AvailableNegative875749 - 87653429588.6
starvation-inducible dna-binding proteinGA0116948_10290Not AvailableNegative876614 - 87708418185.4
predicted arabinose efflux permease, mfs familyGA0116948_10291Not AvailablePositive877262 - 87844042691.2
dna recombination protein rmucGA0116948_10292Not AvailableNegative878505 - 87972246450.9
3-deoxy-alpha-d-manno-octulosonate 8-oxidaseGA0116948_10293Not AvailableNegative879854 - 88093039772.2
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)/3-deoxy-alpha-d-manno-octulosonate 8-oxidaseGA0116948_10294Not AvailableNegative881001 - 88172627087.8
8-amino-3,8-dideoxy-alpha-d-manno-octulosonate transaminaseGA0116948_10295Not AvailableNegative881812 - 88300243251.8
ketosteroid isomerase homologGA0116948_10296Not AvailablePositive883109 - 88354916676.3

Displaying genes 721 – 730 of 4259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.