Chitinophaga costaii strain A37T2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga costaii strain A37T2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been documented to possess a single replicon, indicating a streamlined genomic structure. Its genomic data is available under the accession number FMAR00000000.1. In terms of its ecological role, Chitinophaga species, including C. costaii, are known to be involved in the decomposition of chitin, a major component of the exoskeletons of arthropods and the cell walls of fungi. This attribute highlights the potential significance of C. costaii in nutrient cycling within its environment, particularly in habitats rich in chitinous materials. Such decomposition processes contribute to soil health and the recycling of organic matter, which is critical for ecosystem functioning. Overall, the structural and genomic characteristics of Chitinophaga costaii strain A37T2 position it as a noteworthy organism within the microbial community, particularly in its role in chitin degradation and the associated ecological impacts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga costaii
Strainstrain A37T2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga costaii strain A37T2 genome assembly, contig:

Gene Summary

Adenine Count

1332907 bp

Thymine Count

1327935 bp

Guanine Count

1200286 bp

Cytosine Count

1213312 bp

Genome Length

5074440 bp

Protein-coding Genes

4204 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family proteinGA0116948_12126Not AvailableNegative4826624 - 482724423597.3
23s rrna (pseudouridine1915-n3)-methyltransferaseGA0116948_12127Not AvailableNegative4827262 - 482773518131.2
cold-shock dna-binding protein familyGA0116948_12128Not AvailableNegative4827866 - 48280697831.2
linoleoyl-coa desaturaseGA0116948_12129Not AvailablePositive4828362 - 482945340922.0
Trna-argNot AvailableNot AvailablePositive4829551 - 4829627Not Available
alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin)GA0116948_1222Not AvailableNegative4830102 - 483073723643.2
hypothetical proteinGA0116948_1223Not AvailableNegative4831158 - 483176323253.7
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsGA0116948_1224Not AvailablePositive4831892 - 483289638510.1
hypothetical proteinGA0116948_1225Not AvailableNegative4833042 - 483376426338.7
adenine deaminaseGA0116948_1226Not AvailablePositive4833839 - 483554861531.5

Displaying genes 4041 – 4050 of 4259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.