Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga costaii |
| Strain | strain A37T2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1332907 bp
Thymine Count
1327935 bp
Guanine Count
1200286 bp
Cytosine Count
1213312 bp
Genome Length
5074440 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | GA0116948_11695 | Not Available | Negative | 4418267 - 4418965 | 26162.4 |
| predicted zn-dependent peptidase | GA0116948_11696 | Not Available | Negative | 4419101 - 4422049 | 110238.0 |
| fecr family protein | GA0116948_11697 | Not Available | Negative | 4422181 - 4422948 | 28581.4 |
| hypothetical protein | GA0116948_11698 | Not Available | Negative | 4423037 - 4423333 | 11268.8 |
| outer membrane protein beta-barrel domain-containing protein | GA0116948_11699 | Not Available | Negative | 4423374 - 4424315 | 35803.4 |
| hypothetical protein | GA0116948_116100 | Not Available | Negative | 4424312 - 4425427 | 39391.5 |
| rna polymerase sigma-70 factor, ecf subfamily | GA0116948_116101 | Not Available | Negative | 4425449 - 4426051 | 23588.4 |
| 2-amino-3-ketobutyrate coenzyme a ligase | GA0116948_116102 | Not Available | Positive | 4426244 - 4427434 | 43127.5 |
| rnd family efflux transporter, mfp subunit | GA0116948_116103 | Not Available | Negative | 4427749 - 4428870 | 41000.2 |
| multidrug efflux pump subunit acrb | GA0116948_116104 | Not Available | Negative | 4428909 - 4432121 | 116489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
