Chitinophaga costaii strain A37T2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga costaii strain A37T2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been documented to possess a single replicon, indicating a streamlined genomic structure. Its genomic data is available under the accession number FMAR00000000.1. In terms of its ecological role, Chitinophaga species, including C. costaii, are known to be involved in the decomposition of chitin, a major component of the exoskeletons of arthropods and the cell walls of fungi. This attribute highlights the potential significance of C. costaii in nutrient cycling within its environment, particularly in habitats rich in chitinous materials. Such decomposition processes contribute to soil health and the recycling of organic matter, which is critical for ecosystem functioning. Overall, the structural and genomic characteristics of Chitinophaga costaii strain A37T2 position it as a noteworthy organism within the microbial community, particularly in its role in chitin degradation and the associated ecological impacts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga costaii
Strainstrain A37T2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga costaii strain A37T2 genome assembly, contig:

Gene Summary

Adenine Count

1332907 bp

Thymine Count

1327935 bp

Guanine Count

1200286 bp

Cytosine Count

1213312 bp

Genome Length

5074440 bp

Protein-coding Genes

4204 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multidrug efflux pump subunit acrbGA0116948_11159Not AvailableNegative3638009 - 3641122115235.0
rnd family efflux transporter, mfp subunitGA0116948_11160Not AvailableNegative3641134 - 364216836788.0
hypothetical proteinGA0116948_11161Not AvailableNegative3643870 - 3649419203754.0
aaa domain-containing proteinGA0116948_11162Not AvailableNegative3649852 - 3654348169930.0
hypothetical proteinGA0116948_11163Not AvailablePositive3654473 - 36546706721.49
exodeoxyribonuclease i subunit dGA0116948_11164Not AvailableNegative3654587 - 365509919198.1
Trna-alaNot AvailableNot AvailablePositive3655442 - 3655517Not Available
Trna-leuNot AvailableNot AvailablePositive3655959 - 3656043Not Available
trigger factorGA0116948_11167Not AvailablePositive3656797 - 365817952600.3
atp-dependent clp protease proteolytic subunit clppGA0116948_11168Not AvailablePositive3658169 - 365887026018.4

Displaying genes 3061 – 3070 of 4259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.