Chitinophaga costaii strain A37T2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga costaii strain A37T2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been documented to possess a single replicon, indicating a streamlined genomic structure. Its genomic data is available under the accession number FMAR00000000.1. In terms of its ecological role, Chitinophaga species, including C. costaii, are known to be involved in the decomposition of chitin, a major component of the exoskeletons of arthropods and the cell walls of fungi. This attribute highlights the potential significance of C. costaii in nutrient cycling within its environment, particularly in habitats rich in chitinous materials. Such decomposition processes contribute to soil health and the recycling of organic matter, which is critical for ecosystem functioning. Overall, the structural and genomic characteristics of Chitinophaga costaii strain A37T2 position it as a noteworthy organism within the microbial community, particularly in its role in chitin degradation and the associated ecological impacts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga costaii
Strainstrain A37T2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga costaii strain A37T2 genome assembly, contig:

Gene Summary

Adenine Count

1332907 bp

Thymine Count

1327935 bp

Guanine Count

1200286 bp

Cytosine Count

1213312 bp

Genome Length

5074440 bp

Protein-coding Genes

4204 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGA0116948_104240Not AvailableNegative2014097 - 201439611674.2
rnd family efflux transporter, mfp subunitGA0116948_104241Not AvailableNegative2014416 - 201542636627.7
outer membrane protein, cobalt-zinc-cadmium efflux systemGA0116948_104242Not AvailableNegative2015432 - 201668547247.1
outer membrane protein tolcGA0116948_104243Not AvailablePositive2017499 - 201883350323.6
membrane fusion protein, multidrug efflux systemGA0116948_104244Not AvailablePositive2018946 - 202014242947.1
hydrophobic/amphiphilic exporter-1, hae1 familyGA0116948_104245Not AvailablePositive2020233 - 2023421115341.0
outer membrane receptor proteins, mostly fe transportGA0116948_104246Not AvailablePositive2023805 - 202650198838.2
adp-ribose pyrophosphatase yjhb, nudix familyGA0116948_104247Not AvailablePositive2026576 - 202728027076.7
phenazine biosynthesis protein phzf familyGA0116948_104248Not AvailableNegative2027305 - 202810528546.1
signal transduction histidine kinaseGA0116948_104249Not AvailableNegative2028355 - 2031960134540.0

Displaying genes 1681 – 1690 of 4259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.