Chitinophaga costaii strain A37T2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga costaii strain A37T2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been documented to possess a single replicon, indicating a streamlined genomic structure. Its genomic data is available under the accession number FMAR00000000.1. In terms of its ecological role, Chitinophaga species, including C. costaii, are known to be involved in the decomposition of chitin, a major component of the exoskeletons of arthropods and the cell walls of fungi. This attribute highlights the potential significance of C. costaii in nutrient cycling within its environment, particularly in habitats rich in chitinous materials. Such decomposition processes contribute to soil health and the recycling of organic matter, which is critical for ecosystem functioning. Overall, the structural and genomic characteristics of Chitinophaga costaii strain A37T2 position it as a noteworthy organism within the microbial community, particularly in its role in chitin degradation and the associated ecological impacts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga costaii
Strainstrain A37T2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga costaii strain A37T2 genome assembly, contig:

Gene Summary

Adenine Count

1332907 bp

Thymine Count

1327935 bp

Guanine Count

1200286 bp

Cytosine Count

1213312 bp

Genome Length

5074440 bp

Protein-coding Genes

4204 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconate 2-dehydrogenase subunit 3GA0116948_10480Not AvailablePositive1827692 - 182832423051.9
choline dehydrogenaseGA0116948_10481Not AvailablePositive1828428 - 183012563459.1
cbs domain-containing proteinGA0116948_10482Not AvailablePositive1830367 - 183081316851.4
outer membrane receptor proteins, mostly fe transportGA0116948_10483Not AvailableNegative1831090 - 183353791480.0
aspartate kinaseGA0116948_10484Not AvailableNegative1833894 - 183522849957.1
d-fructose 1,6-bisphosphataseGA0116948_10485Not AvailablePositive1835377 - 183639337231.9
uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domainGA0116948_10486Not AvailablePositive1836466 - 183696917793.3
abc-2 type transport system atp-binding proteinGA0116948_10487Not AvailablePositive1837127 - 183789128249.0
dinb superfamily proteinGA0116948_10488Not AvailablePositive1837910 - 183845221108.2
8-oxo-dgtp pyrophosphatase mutt, nudix familyGA0116948_10489Not AvailablePositive1838471 - 183902821171.2

Displaying genes 1521 – 1530 of 4259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.