Enterobacter roggenkampii strain e54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Enterobacter

Description

Enterobacter roggenkampii strain e54 is a rod-shaped bacterium that possesses flagella, indicating the capability for motility. The presence of flagella can play a significant role in the bacterium's ability to navigate its environment, which may be important for colonization and survival in various ecological niches. This strain is characterized by having a single replicon, which suggests a simplified genetic structure compared to some other bacterial species that may have multiple replicons. This can influence the way genetic information is replicated and distributed during cell division. The genomic information of Enterobacter roggenkampii strain e54 is accessible through the accession number FKET00000000.1, which provides a reference for further studies and comparisons with other strains. From a biological and ecological perspective, the combination of rod shape and motility may allow Enterobacter roggenkampii strain e54 to thrive in diverse environments, potentially including soil, water, or as a part of the microbiota in plants or animals. Understanding the traits of this strain can provide insights into its ecological roles, interactions with other microorganisms, and potential applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter roggenkampii
Strainstrain e54

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Enterobacter roggenkampii strain e54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Enterobacter roggenkampii strain e54 genome assembly, contig:

Gene Summary

Adenine Count

1205398 bp

Thymine Count

1208961 bp

Guanine Count

1508076 bp

Cytosine Count

1488763 bp

Genome Length

5417607 bp

Protein-coding Genes

4748 genes

Non-Coding Genes

488 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetic acid degradation nadh oxidoreductase paaeSAMEA2273122_04375P76081Positive4485525 - 448659539034.8
enoyl-coa hydratase/isomeraseSAMEA2273122_04376P76082Positive4486592 - 448735927122.0
phenylacetate degradation%2c enoyl-coa hydratase paabSAMEA2273122_04377P77467Positive4487362 - 448814728183.0
3-hydroxyacyl-coa dehydrogenaseSAMEA2273122_04378P76083Positive4488149 - 448957351679.1
acyl-coenzyme a thioesterase paaiSAMEA2273122_04379P76084Positive4489563 - 448998515029.9
beta-ketoadipyl coa thiolaseSAMEA2273122_04380P0C7L3Positive4489985 - 449119042045.8
phenylacetate-coenzyme a ligase paafSAMEA2273122_04381P76085Positive4491218 - 449253448808.5
paax family transcriptional regulatorSAMEA2273122_04382P76086Positive4492646 - 449357234366.6
phenylacetic acid degradation protein paaySAMEA2273122_04383P77181Positive4493582 - 449418421783.3
beta-lactamaseSAMEA2273122_04384P18539Negative4494087 - 449535846328.0

Displaying genes 4351 – 4360 of 5236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

287 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da

Displaying 1–10 of 287 metabolites

Health Effects

No health effects information available for this bacterium.