Enterobacter roggenkampii strain e54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Enterobacter

Description

Enterobacter roggenkampii strain e54 is a rod-shaped bacterium that possesses flagella, indicating the capability for motility. The presence of flagella can play a significant role in the bacterium's ability to navigate its environment, which may be important for colonization and survival in various ecological niches. This strain is characterized by having a single replicon, which suggests a simplified genetic structure compared to some other bacterial species that may have multiple replicons. This can influence the way genetic information is replicated and distributed during cell division. The genomic information of Enterobacter roggenkampii strain e54 is accessible through the accession number FKET00000000.1, which provides a reference for further studies and comparisons with other strains. From a biological and ecological perspective, the combination of rod shape and motility may allow Enterobacter roggenkampii strain e54 to thrive in diverse environments, potentially including soil, water, or as a part of the microbiota in plants or animals. Understanding the traits of this strain can provide insights into its ecological roles, interactions with other microorganisms, and potential applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter roggenkampii
Strainstrain e54

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Enterobacter roggenkampii strain e54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Enterobacter roggenkampii strain e54 genome assembly, contig:

Gene Summary

Adenine Count

1205398 bp

Thymine Count

1208961 bp

Guanine Count

1508076 bp

Cytosine Count

1488763 bp

Genome Length

5417607 bp

Protein-coding Genes

4748 genes

Non-Coding Genes

488 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside diphosphate kinaseSAMEA2273122_02507B5XNL1Positive2621733 - 262216415571.4
ribosomal rna large subunit methyltransferase nSAMEA2273122_02508A4WD95Positive2622334 - 262350043440.5
cytoskeleton protein rodzSAMEA2273122_02509Q8Z4P3Positive2623793 - 262480936014.3
protein yfgmSAMEA2273122_02511P76576Positive2627323 - 262794322162.2
outer membrane protein assembly complex subunit yfglSAMEA2273122_02512H9L451Positive2627954 - 262913241908.7
gtp-binding protein engaSAMEA2273122_02513A6TCD0Positive2629245 - 263072055025.9
amino acid/peptide transporterSAMEA2273122_02514A0A2R9TD79Positive2631021 - 263256555565.4
oxidoreductase domain-containing proteinSAMEA2273122_02515Not AvailablePositive2632623 - 263365737556.5
protein yfgjSAMEA2273122_02516P76575Positive2633708 - 26339297990.67
uncharacterised proteinSAMEA2273122_02517Not AvailableNegative2633926 - 263427612747.1

Displaying genes 2801 – 2810 of 5236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

287 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da

Displaying 1–10 of 287 metabolites

Health Effects

No health effects information available for this bacterium.