Grimontia sp. 96-237 strain CECT 9029

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia sp. strain 96-237, also designated as CECT 9029, is characterized as a Gram-negative bacterium. This classification indicates that the bacterium has a thin peptidoglycan layer surrounded by an outer membrane, which is typical of Gram-negative organisms. The strain possesses a single replicon, suggesting a streamlined genetic organization that may be advantageous for its adaptability and survival in various environments. The genomic data for Grimontia sp. 96-237 is available under the accession number FIZX00000000.1, indicating that it has been sequenced and is accessible for further study. While specific ecological roles and interactions of Grimontia sp. 96-237 are not detailed, the characteristics of Gram-negative bacteria often suggest ecological versatility. Many such bacteria are known to inhabit diverse environments, including soil, water, and various host organisms. This adaptability may enable Grimontia sp. 96-237 to play a role in biogeochemical cycles or as part of microbial communities. Overall, the traits of Grimontia sp. 96-237 imply a potential for ecological significance, although the specific contributions of this strain to its environment remain to be explored. Further research could elucidate its role within microbial ecosystems and its interactions with other organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia celer
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia sp. 96-237 strain CECT 9029 genome assembly, contig:

Gene Summary

Adenine Count

1437505 bp

Thymine Count

1457047 bp

Guanine Count

1365704 bp

Cytosine Count

1347230 bp

Genome Length

5607486 bp

Protein-coding Genes

4977 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit eGCE9029_02525P65574Positive2843826 - 284434118693.2
nadp-reducing hydrogenase subunit hndcGCE9029_02526Q46507Positive2844338 - 284593657343.7
putative formate dehydrogenaseGCE9029_02527O34720Positive2845955 - 2848828104813.0
nadh-dependent formate dehydrogenase delta subunit fdsdGCE9029_02528Not AvailablePositive2848841 - 28490839074.73
vibriobactin utilization protein viubGCE9029_02529Not AvailableNegative2849144 - 284991728657.2
hypothetical proteinGCE9029_02530Not AvailablePositive2850309 - 285092622621.0
inner membrane protein yqikGCE9029_02531Not AvailablePositive2850951 - 285303878405.4
chromosome partition protein smcGCE9029_02532Not AvailablePositive2853099 - 2857964182550.0
phospholipase d precursorGCE9029_02533A8IW99Positive2857965 - 285866926898.7
tela-like proteinGCE9029_02534P37535Positive2858686 - 285975040208.7

Displaying genes 2541 – 2550 of 5103 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

292 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 292 metabolites

Health Effects

No health effects information available for this bacterium.