Burkholderia calidae type strain LMG 29321

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Caballeronia

Description

Burkholderia calidae type strain LMG 29321 is a Gram-negative bacterium characterized by its rod shape. This strain has a single replicon, which is an important trait for understanding its genetic organization and replication mechanisms. The strain is cataloged under the accession number FCOX00000000.2, which provides a reference for researchers and microbiologists interested in its genomic data. As a member of the Burkholderia genus, B. calidae is likely to exhibit traits common to this group, such as metabolic versatility and the ability to thrive in diverse environments. The genus Burkholderia is known for its ecological roles, including interactions with plants and potential applications in bioremediation and agriculture. The specific traits of Burkholderia calidae LMG 29321, particularly its Gram-negative status and rod shape, suggest that it may possess unique physiological characteristics that enable it to adapt to various ecological niches. Understanding these traits can provide insights into its ecological interactions and potential uses within biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCaballeronia
SpeciesCaballeronia calidae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia calidae type strain LMG 29321 genome assembly,

Gene Summary

Adenine Count

1801528 bp

Thymine Count

1800576 bp

Guanine Count

3004998 bp

Cytosine Count

3002591 bp

Genome Length

9609693 bp

Protein-coding Genes

8615 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
taurine catabolism dioxygenase taud, tfda family proteinAWB78_08196Not AvailableNegative8953828 - 895434019287.0
fad dependent oxidoreductaseAWB78_08197Not AvailableNegative8954426 - 895568245983.5
carbon starvation induced proteinAWB78_08198Not AvailableNegative8955682 - 895659934679.2
lysr family transcriptional regulatorAWB78_08199Not AvailablePositive8956918 - 895753222131.8
transmembrane anti-sigma factorAWB78_08200Not AvailableNegative8958314 - 895915030603.4
ecf subfamily rna polymerase sigma-24 factorAWB78_08201Not AvailableNegative8959147 - 895968020036.0
hypothetical proteinAWB78_08202Not AvailablePositive8959858 - 89600948593.38
hcp1 family type vi secretion system effectorAWB78_08203Not AvailablePositive8960275 - 896083519307.5
impa domain-containing proteinAWB78_08204Not AvailablePositive8960854 - 896190636575.0
type vi secretion proteinAWB78_08205Not AvailablePositive8961940 - 896246719221.2

Displaying genes 8191 – 8200 of 8730 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.