Burkholderia calidae type strain LMG 29321

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Caballeronia

Description

Burkholderia calidae type strain LMG 29321 is a Gram-negative bacterium characterized by its rod shape. This strain has a single replicon, which is an important trait for understanding its genetic organization and replication mechanisms. The strain is cataloged under the accession number FCOX00000000.2, which provides a reference for researchers and microbiologists interested in its genomic data. As a member of the Burkholderia genus, B. calidae is likely to exhibit traits common to this group, such as metabolic versatility and the ability to thrive in diverse environments. The genus Burkholderia is known for its ecological roles, including interactions with plants and potential applications in bioremediation and agriculture. The specific traits of Burkholderia calidae LMG 29321, particularly its Gram-negative status and rod shape, suggest that it may possess unique physiological characteristics that enable it to adapt to various ecological niches. Understanding these traits can provide insights into its ecological interactions and potential uses within biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCaballeronia
SpeciesCaballeronia calidae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia calidae type strain LMG 29321 genome assembly,

Gene Summary

Adenine Count

1801528 bp

Thymine Count

1800576 bp

Guanine Count

3004998 bp

Cytosine Count

3002591 bp

Genome Length

9609693 bp

Protein-coding Genes

8615 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeaseAWB78_03219Not AvailablePositive3468158 - 346881723600.8
arginine abc transporter atp-binding proteinAWB78_03220Not AvailablePositive3468995 - 346956120766.1
fad-dependent oxidoreductaseAWB78_03221Not AvailablePositive3469558 - 347085646437.3
fad dependent oxidoreductaseAWB78_03222Not AvailablePositive3470898 - 347215745778.7
choline dehydrogenaseAWB78_03223Not AvailableNegative3472200 - 347389162399.3
cytosine/purines uracil thiamine allantoin permeaseAWB78_03224Not AvailableNegative3473942 - 347547155268.7
aldehyde dehydrogenaseAWB78_03225Not AvailableNegative3475517 - 347702554487.3
agmatinaseAWB78_03226Not AvailableNegative3477108 - 347808235292.0
lysr family transcriptional regulatorAWB78_03227Not AvailablePositive3478234 - 347918134720.7
d-amino acid dehydrogenase small subunitAWB78_03228Not AvailablePositive3479495 - 348074845983.8

Displaying genes 3261 – 3270 of 8730 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.