Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ribosomal rna 16s ribosomal rna | Not Available | Not Available | Positive | 33 - 1505 | Not Available |
| atp-dependent dna helicase recq | AGR1A_Cc10001 | Not Available | Positive | 197 - 2005 | 67033.8 |
| Ribosomal rna 23s ribosomal rna | Not Available | Not Available | Positive | 365 - 3169 | Not Available |
| rok family transcriptional regulator, putative sugar kinase | AGR1A_Cc10002 | Not Available | Negative | 2060 - 3292 | 44494.8 |
| sugar abc transporter, substrate binding protein | AGR1A_Cc10003 | Not Available | Positive | 3559 - 4581 | 35198.1 |
| sugar abc transporter, membrane spanning protein | AGR1A_Cc10004 | Not Available | Positive | 4804 - 5886 | 38326.7 |
| sugar abc transporter, nucleotide binding/atpase protein | AGR1A_Cc10005 | Not Available | Positive | 5886 - 6668 | 28175.5 |
| fructose transport system kinase | AGR1A_Cc10006 | Not Available | Positive | 6665 - 7294 | 22892.6 |
| hypothetical protein | AGR1A_Cc10007 | Not Available | Positive | 7403 - 7540 | 5413.87 |
| conserved hypothetical protein | AGR1A_Cc10008 | Not Available | Negative | 7501 - 7752 | 8911.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


