Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxygen-independent coproporphyrinogen iii oxidase (yggw) | AGR1A_Cc20004 | Not Available | Negative | 251524 - 252732 | 44577.9 |
| putative ham1 protein | AGR1A_Cc20005 | Not Available | Negative | 252729 - 253373 | 23038.9 |
| rnase ph | AGR1A_Cc20006 | Not Available | Negative | 253391 - 254107 | 25992.2 |
| heat-inducible transcription repressor | AGR1A_Cc20007 | Not Available | Positive | 254244 - 255335 | 39811.9 |
| protein grpe (hsp-70 cofactor) | AGR1A_Cc20008 | Not Available | Positive | 255449 - 256084 | 22920.0 |
| nitrogen regulatory protein (enzyme iia-ntr) (includes: phosphotransferase enzyme iia component (pts system eiia component)) | AGR1A_Cc20009 | Not Available | Negative | 256214 - 256675 | 16413.8 |
| putative sigma (54) modulation protein | AGR1A_Cc20010 | Not Available | Negative | 256758 - 257339 | 21326.2 |
| rna polymerase sigma-54 factor | AGR1A_Cc20011 | Not Available | Negative | 257574 - 259124 | 57099.4 |
| putative lipopolysaccharide transport protein b: atp-binding component of abc superfamily | AGR1A_Cc20012 | Not Available | Negative | 259278 - 260087 | 29377.5 |
| conserved exported hypothetical protein | AGR1A_Cc20013 | Not Available | Negative | 260097 - 260690 | 20959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


