Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | AGR1A_Cc20707 | Not Available | Negative | 931834 - 933333 | 53774.6 |
| putative laba-like protein | AGR1A_Cc20708 | Not Available | Negative | 933558 - 934127 | 21585.9 |
| rna polymerase omega subunit | AGR1A_Cc20709 | Not Available | Positive | 934519 - 934911 | 14442.6 |
| gtp pyrophosphokinase (atp:gtp 3'-pyrophosphotransferase) (ppgpp synthetase i) ((p)ppgpp synthetase) | AGR1A_Cc20710 | Not Available | Positive | 935044 - 937278 | 83833.8 |
| conserved hypothetical protein | AGR1A_Cc20711 | Not Available | Positive | 937475 - 937621 | 5760.92 |
| hypothetical protein | AGR1A_Cc20712 | Not Available | Positive | 937762 - 937971 | 7468.77 |
| conserved membrane hypothetical protein | AGR1A_Cc20713 | Not Available | Positive | 938068 - 938646 | 21475.7 |
| acyl carrier protein synthase (acp-coa phosphopantetheinyltransferase)(holo-acp synthase)(holo-(acyl-carrier-protein) synthase (coa:apo-(acyl-carrier-protein) pantetheinephosphotransferase)) | AGR1A_Cc20714 | Not Available | Positive | 938643 - 939047 | 14576.6 |
| hypothetical protein | AGR1A_Cc20715 | Not Available | Positive | 939169 - 939258 | 2917.36 |
| signal peptidase i (spase i) (leader peptidase i) | AGR1A_Cc20716 | Not Available | Positive | 939259 - 940005 | 28118.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


