Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein, hypothetical upf0301 protein | AGR1A_Cc20458 | Not Available | Positive | 699615 - 700247 | 22917.4 |
| conserved hypothetical protein | AGR1A_Cc20459 | Not Available | Positive | 700355 - 700546 | 6457.72 |
| conserved hypothetical protein | AGR1A_Cc20460 | Not Available | Positive | 700714 - 701820 | 41477.9 |
| putative diguanylate cyclase (ggdef)/phosphodiesterase (eal) with pas domain | AGR1A_Cc20461 | Not Available | Negative | 701944 - 704859 | 107501.0 |
| putative ribosomal-protein-alanine n-acetyltransferase (rimj-like) | AGR1A_Cc20462 | Not Available | Negative | 704856 - 705455 | 23012.6 |
| putative zinc protease (mpp-like) | AGR1A_Cc20463 | Not Available | Negative | 705489 - 706787 | 47807.9 |
| threonine synthase | AGR1A_Cc20464 | Not Available | Negative | 706807 - 708204 | 50722.9 |
| conserved hypothetical protein | AGR1A_Cc20465 | Not Available | Positive | 708448 - 709020 | 19481.1 |
| hydrolase phosphatase protein | AGR1A_Cc20466 | Not Available | Negative | 709217 - 709906 | 24827.8 |
| gntr family transcriptional regulator | AGR1A_Cc20467 | Not Available | Positive | 709945 - 710778 | 30797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


