Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein | AGR1A_Cc20448 | Not Available | Positive | 692113 - 692742 | 22815.3 |
| cytochrome c oxidase, subunit iii | AGR1A_Cc20449 | Not Available | Positive | 692806 - 693681 | 33181.4 |
| conserved hypothetical protein | AGR1A_Cc20450 | Not Available | Positive | 693782 - 694168 | 13858.2 |
| surfeit 1 | AGR1A_Cc20451 | Not Available | Positive | 694137 - 694913 | 28416.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 | AGR1A_Cc20452 | Not Available | Positive | 694977 - 696023 | 37486.8 |
| homoserine kinase | AGR1A_Cc20453 | Not Available | Positive | 696116 - 697084 | 36165.5 |
| ribonuclease h (rnase h) | AGR1A_Cc20454 | Not Available | Positive | 697081 - 697521 | 16262.2 |
| conserved hypothetical protein | AGR1A_Cc20455 | Not Available | Positive | 697650 - 697958 | 10983.3 |
| putative peroxiredoxin | AGR1A_Cc20456 | Not Available | Negative | 698023 - 698508 | 16808.0 |
| conserved hypothetical protein | AGR1A_Cc20457 | Not Available | Negative | 698631 - 699353 | 26473.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


