Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AGR1A_Cc20376 | Not Available | Negative | 624025 - 624312 | 10543.5 |
| conserved hypothetical protein | AGR1A_Cc20377 | Not Available | Negative | 624435 - 624656 | 7998.44 |
| dna mismatch repair protein mutl | AGR1A_Cc20378 | Not Available | Negative | 624807 - 626636 | 65511.2 |
| two component sensor kinase | AGR1A_Cc20379 | Not Available | Positive | 626993 - 628654 | 60604.8 |
| ggdef family protein | AGR1A_Cc20380 | Not Available | Positive | 628797 - 630149 | 49832.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (6-phospho-2-dehydro-3-deoxygalactonate aldolase) (2-oxo-3-deoxygalactonate 6-phosphate aldolase) | AGR1A_Cc20382 | Not Available | Negative | 631136 - 631765 | 21397.3 |
| 2-dehydro-3-deoxygalactonokinase (2-keto-3-deoxy-galactonokinase) (2-oxo-3-deoxygalactonate kinase) | AGR1A_Cc20383 | Not Available | Negative | 631843 - 632757 | 32207.7 |
| 3-oxoacyl-acyl carrier protein reductase | AGR1A_Cc20384 | Not Available | Negative | 632757 - 633527 | 27066.6 |
| transcriptional regulator, luxr family protein | AGR1A_Cc20386 | Not Available | Positive | 634690 - 635430 | 27800.7 |
| nitrate transport protein | AGR1A_Cc20387 | Not Available | Positive | 635509 - 636732 | 43898.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


