Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | AGR1A_Cc20366 | Not Available | Positive | 612307 - 614283 | 71440.4 |
| putative methyltransferase | AGR1A_Cc20367 | Not Available | Positive | 614264 - 614821 | 20168.1 |
| putative patatin family protein | AGR1A_Cc20368 | Not Available | Positive | 615010 - 615936 | 33030.2 |
| glutathione-regulated potassium-efflux system protein kefb | AGR1A_Cc20369 | Not Available | Negative | 615979 - 617808 | 66105.2 |
| putative zn-dependent protease, pmba-like protein | AGR1A_Cc20370 | Not Available | Positive | 617910 - 619271 | 48040.6 |
| putative inositol monophosphatase family protein | AGR1A_Cc20371 | Not Available | Positive | 619365 - 620171 | 28962.4 |
| conserved hypothetical protein | AGR1A_Cc20372 | Not Available | Positive | 620230 - 620469 | 9130.94 |
| 3-deoxy-d-manno-octulosonic-acid transferase (kdo transferase) | AGR1A_Cc20373 | Not Available | Positive | 620685 - 622007 | 49114.2 |
| phosphoglycolate phosphatase | AGR1A_Cc20374 | Not Available | Positive | 622001 - 622738 | 25512.3 |
| tetraacyldisaccharide 4'-kinase (lipid a 4'-kinase) | AGR1A_Cc20375 | Not Available | Positive | 622903 - 623949 | 37744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


