Agrobacterium tumefaciens str. CFBP 5771

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. CFBP 5771 is a Gram-negative, rod-shaped bacterium known for its role in plant pathology, particularly in inducing tumors in various host plants, a condition known as crown gall disease. This organism exhibits mobility due to the presence of flagella and is classified as an aerobe, requiring oxygen for its growth. It thrives optimally at 25°C and falls within the mesophilic temperature range. The bacterium is free-living and has a single replicon with a structure consisting of two membranes, characteristic of Gram-negative bacteria. A. tumefaciens interacts with a wide range of hosts within the Viridiplantae kingdom, including economically significant crops such as Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Oryza sativa (rice). Other hosts include Arabidopsis, Glycine max (soybean), and even ornamental plants like Ficus benjamina (weeping fig) and Zingiber officinale (ginger). The pathogenicity of A. tumefaciens is primarily due to its ability to transfer DNA to plant cells, leading to the formation of tumors. The health effects associated with this bacterium include various symptoms of crown gall disease, which can detrimentally affect plant growth and yield. In ecological terms, A. tumefaciens plays a significant role in the dynamics of plant-microbe interactions, influencing plant health and agricultural productivity. Understanding its mechanisms of pathogenicity can inform disease management strategies in agriculture, particularly for crops that are susceptible to crown gall tumors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainCFBP 5771

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. CFBP 5771
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. CFBP 5771 genome assembly, contig:

Gene Summary

Adenine Count

1176494 bp

Thymine Count

1164007 bp

Guanine Count

1641189 bp

Cytosine Count

1657053 bp

Genome Length

5638743 bp

Protein-coding Genes

5502 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter, permease protein pstaAGR1A_Cc20142Not AvailablePositive380029 - 38135147208.5
high-affinity phosphate transport protein (abc superfamily, atp_bind)AGR1A_Cc20143Not AvailablePositive381366 - 38218130429.6
transcriptional repressor for high-affinity phosphate uptakeAGR1A_Cc20144Not AvailablePositive382280 - 38300526594.7
response regulator in two-component regulatory system with phor (or crec), regulation of pi uptake (ompr family)AGR1A_Cc20145Not AvailablePositive383037 - 38372026008.6
putative gcra cell cycle regulatorAGR1A_Cc20146Not AvailableNegative384020 - 38455319332.2
acetylornithine aminotransferaseAGR1A_Cc20147Not AvailablePositive384984 - 38618642518.1
ornithine carbamoyltransferase (otcase)AGR1A_Cc20148Not AvailablePositive386241 - 38715833534.1
heat shock protein hsp33AGR1A_Cc20149Not AvailablePositive387382 - 38837136108.5
protein apag, putative protein affecting mg2+/co2+ transportAGR1A_Cc20150Not AvailableNegative388410 - 38880214697.0
o-succinylhomoserine sulfhydrylase (osh sulfhydrylase)AGR1A_Cc20151Not AvailableNegative389039 - 39022342513.9

Displaying genes 481 – 490 of 1410 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total