Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase (dutpase) (dutp pyrophosphatase) | AGR1A_Cc10243 | Not Available | Negative | 239517 - 239987 | 16480.8 |
| peptide chain release factor rf-3 | AGR1A_Cc10244 | Not Available | Positive | 240078 - 241661 | 58862.8 |
| coenzyme a biosynthesis bifunctional protein coabc (dna/pantothenate metabolism flavoprotein) (includes: phosphopantothenoylcysteine decarboxylase (coac) | AGR1A_Cc10245 | Not Available | Positive | 241732 - 242937 | 42467.7 |
| conserved hypothetical protein | AGR1A_Cc10246 | Not Available | Positive | 242934 - 243293 | 13847.5 |
| sterol desaturase | AGR1A_Cc10247 | Not Available | Negative | 243317 - 244231 | 34486.1 |
| ubiquinone biosynthesis protein ubib | AGR1A_Cc10248 | Not Available | Negative | 244395 - 245969 | 58163.8 |
| ubiquinone/menaquinone biosynthesis methyltransferase ubie | AGR1A_Cc10249 | Not Available | Negative | 246006 - 246782 | 28721.3 |
| bifunctional mutm protein:formamidopyrimidine-dna glycosylase (fapy-dna glycosylase) | AGR1A_Cc10250 | Not Available | Positive | 246926 - 247828 | 32929.5 |
| 30s ribosomal protein s20 | AGR1A_Cc20002 | Not Available | Positive | 248847 - 249113 | 9466.55 |
| chromosomal replication initiator protein dnaa | AGR1A_Cc20003 | Not Available | Positive | 249986 - 251449 | 54653.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


