Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | AGR1A_Cc10185 | Not Available | Positive | 186167 - 186589 | 15940.8 |
| 50s ribosomal protein l35 | AGR1A_Cc10186 | Not Available | Positive | 186784 - 186987 | 7301.26 |
| 50s ribosomal subunit protein l20 | AGR1A_Cc10187 | Not Available | Positive | 187028 - 187432 | 15162.4 |
| putative kinase | AGR1A_Cc10188 | Not Available | Positive | 187598 - 188476 | 33111.5 |
| phenylalanyl-trna synthetase alpha chain (phenylalanine--trna ligase alpha chain) | AGR1A_Cc10189 | Not Available | Positive | 188469 - 189551 | 40374.3 |
| phenylalanyl-trna synthetase beta chain (phenylalanine--trna ligase beta chain) | AGR1A_Cc10190 | Not Available | Positive | 189576 - 191999 | 86172.5 |
| aldo-keto reductase | AGR1A_Cc10191 | Not Available | Negative | 192055 - 193056 | 35712.9 |
| putative transcriptional regulatory protein, lysr family | AGR1A_Cc10192 | Not Available | Positive | 193173 - 194063 | 33049.9 |
| putative acetyltransferase | AGR1A_Cc10193 | Not Available | Negative | 194064 - 194507 | 17270.4 |
| putative oxidoreductase, aldo/keto reductase family | AGR1A_Cc10194 | Not Available | Negative | 194509 - 195459 | 34206.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


