Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phng protein | AGR1A_Cc10116 | Not Available | Negative | 120719 - 121180 | 16719.8 |
| putative transcriptional regulator, gntr family, with an ubic transcription regulator-associated domain | AGR1A_Cc10117 | Not Available | Positive | 121263 - 122000 | 26510.7 |
| 4-hydroxy-tetrahydrodipicolinate (htpa) dehydratase-reductase | AGR1A_Cc10118 | Not Available | Negative | 122023 - 122850 | 28571.3 |
| glucokinase | AGR1A_Cc10119 | Not Available | Negative | 122966 - 123988 | 36268.6 |
| methylglyoxal synthase | AGR1A_Cc10120 | Not Available | Negative | 124010 - 124393 | 13623.5 |
| penicillin-insensitive murein endopeptidase | AGR1A_Cc10121 | Not Available | Negative | 124495 - 125544 | 38181.9 |
| putative oligopeptide transport protein (abc superfamily, peri_bind) | AGR1A_Cc10122 | Not Available | Positive | 125751 - 127595 | 68351.8 |
| putative oligopeptide transport protein (abc superfamily, membrane) | AGR1A_Cc10123 | Not Available | Positive | 127738 - 128832 | 40518.8 |
| putative oligopeptide transport protein (abc superfamily, membrane) | AGR1A_Cc10124 | Not Available | Positive | 128790 - 129977 | 44514.4 |
| putative oligopeptide transport protein (abc superfamily, atp_bind) | AGR1A_Cc10125 | Not Available | Positive | 129974 - 131623 | 60174.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


