Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dimethyl sulfoxide reductase(dmso reductase) | AGR1A_Cc20817 | Not Available | Positive | 1036390 - 1038618 | 81056.6 |
| gdp-mannose pyrophosphatase nudk | AGR1A_Cc20818 | Not Available | Positive | 1038685 - 1039311 | 23041.6 |
| hypothetical protein | AGR1A_Cc20819 | Not Available | Negative | 1039308 - 1039568 | 9339.4 |
| conserved exported hypothetical protein | AGR1A_Cc20820 | Not Available | Negative | 1039724 - 1040659 | 34292.2 |
| phosphoribosylglycinamide formyltransferase (gart) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) | AGR1A_Cc20821 | Not Available | Negative | 1040793 - 1041467 | 23645.6 |
| phosphoribosylformylglycinamidine cyclo-ligase (airs) (phosphoribosyl-aminoimidazole synthetase) (air synthase) | AGR1A_Cc20822 | Not Available | Negative | 1041464 - 1042537 | 36838.2 |
| putative permease | AGR1A_Cc20823 | Not Available | Positive | 1042834 - 1043973 | 41584.6 |
| conserved hypothetical protein | AGR1A_Cc20824 | Not Available | Positive | 1043976 - 1044704 | 26414.4 |
| putative polyphosphate kinase (polyphosphoric acid kinase) (atp-polyphosphate phosphotransferase) ppk | AGR1A_Cc20825 | Not Available | Positive | 1044758 - 1047001 | 84631.9 |
| putative phosphatase, ppx/gppa family | AGR1A_Cc20826 | Not Available | Positive | 1046998 - 1048521 | 55354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


