Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP 5771 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1176494 bp
Thymine Count
1164007 bp
Guanine Count
1641189 bp
Cytosine Count
1657053 bp
Genome Length
5638743 bp
Protein-coding Genes
5502 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pfkb family carbohydrate kinase | AGR1A_Cc10019 | Not Available | Negative | 17185 - 18177 | 35696.2 |
| permease, putative auxin efflux carrier | AGR1A_Cc10020 | Not Available | Positive | 18713 - 19657 | 33139.4 |
| ribosomal rna small subunit methyltransferase | AGR1A_Cc10021 | Not Available | Negative | 19673 - 20689 | 36833.0 |
| polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase) | AGR1A_Cc10022 | Not Available | Negative | 20765 - 22912 | 77589.2 |
| 30s ribosomal subunit protein s15 | AGR1A_Cc10023 | Not Available | Negative | 23183 - 23452 | 10066.1 |
| trna pseudouridine synthase b (trna pseudouridine 55 synthase) (psi55 synthase) (trna-uridine isomerase) (trna pseudouridylate synthase) | AGR1A_Cc10024 | Not Available | Negative | 23616 - 24563 | 34795.6 |
| ribosome-binding factor a | AGR1A_Cc10025 | Not Available | Negative | 24567 - 24983 | 15613.7 |
| translation initiation factor if-2 | AGR1A_Cc10026 | Not Available | Negative | 25059 - 27806 | 99117.1 |
| conserved hypothetical protein | AGR1A_Cc10027 | Not Available | Negative | 27909 - 28610 | 25237.4 |
| transcription elongation factor nusa | AGR1A_Cc10028 | Not Available | Negative | 28607 - 30223 | 60108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


