Agrobacterium genomosp. 6 str. NCPPB 925

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium genomosp. 6 str. NCPPB 925 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses flagella, enabling motility. It is noted for having a single replicon, which is relevant to its genetic organization and replication processes. The strain is cataloged under the accession number FBWM00000000.1, indicating its availability for further study and its inclusion in microbial databases. The classification within the Agrobacterium genus suggests potential roles in plant interactions, particularly in relation to its pathogenicity and symbiotic associations with plants. Ecologically, Agrobacterium species are well-known for their ability to transfer DNA to plant cells, a mechanism that can lead to tumor formation in plants. Understanding the genetic and phenotypic traits of Agrobacterium genomosp. 6 str. NCPPB 925 contributes to a broader comprehension of its ecological roles, particularly in agriculture and biotechnology. The presence of flagella suggests that this strain may also exhibit motility to reach hosts or specific environmental niches, which could be crucial for its survival and interaction with plant systems. Thus, the study of this bacterium may provide insights into its potential applications in genetic engineering and plant disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. NCPPB 925
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium genomosp. 6 str. NCPPB 925
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 6 str. NCPPB 925 genome assembly, contig:

Gene Summary

Adenine Count

1248213 bp

Thymine Count

1252369 bp

Guanine Count

1809571 bp

Cytosine Count

1796078 bp

Genome Length

6106231 bp

Protein-coding Genes

5935 genes

Non-Coding Genes

249 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved exported hypothetical proteinAGR6A_Cc140095Not AvailablePositive449979 - 45063824205.1
glycolate oxidase subunit, (fe-s)protein, glcfAGR6A_Cc140096Not AvailableNegative450635 - 45193646893.1
glycolate oxidase, subunit glceAGR6A_Cc140097Not AvailableNegative451939 - 45317143402.8
glycolate oxidase, subunit glcdAGR6A_Cc140098Not AvailableNegative453369 - 45480250628.0
lysr family transcriptional regulatorAGR6A_Cc140099Not AvailablePositive454914 - 45581332621.3
conserved hypothetical proteinAGR6A_Cc140100Not AvailableNegative455824 - 45709846873.3
transcriptional regulator, gntr familyAGR6A_Cc140101Not AvailablePositive457391 - 45816429201.6
mannosylfructose-phosphate synthaseAGR6A_Cc140102Not AvailablePositive458268 - 45961451193.2
mannosylfructose-phosphate phosphataseAGR6A_Cc140103Not AvailablePositive459611 - 46038127919.1
ntp pyrophosphohydrolase, mutt familyAGR6A_Cc140104Not AvailablePositive460614 - 46109318227.2

Displaying genes 711 – 720 of 2747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.