Frankia sp. DSM 45899

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Frankia sp. DSM 45899 is a nitrogen-fixing actinobacterium characterized by its single replicon. This organism is notable for its role in symbiotic relationships with certain plants, particularly in forming root nodules that facilitate nitrogen fixation. The specific genome accession for Frankia sp. DSM 45899 is FAOZ00000000.1, which provides a reference for genomic studies and further exploration of its functional capabilities. As a member of the genus Frankia, this species contributes to the nitrogen cycle, which is vital for soil fertility and plant growth. The ability to fix atmospheric nitrogen allows Frankia sp. DSM 45899 to enhance nutrient availability in its environment, particularly in nutrient-poor soils. This ecological role is crucial for the establishment and sustainability of plant communities in such habitats. The single replicon characteristic suggests a streamlined genetic architecture, which may be advantageous for efficient regulation of essential metabolic processes, including those involved in nitrogen fixation. Understanding the specific traits and genetic makeup of Frankia sp. DSM 45899 can offer insights into the mechanisms behind its symbiotic relationships and its potential applications in agriculture and ecological restoration. In summary, Frankia sp. DSM 45899, with its unique traits and ecological functions, underscores the importance of nitrogen-fixing bacteria in enhancing soil health and plant growth, contributing significantly to ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia irregularis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. DSM 45899 genome assembly IMG-taxon 2634166352

Gene Summary

Adenine Count

1391200 bp

Thymine Count

1377204 bp

Guanine Count

3358827 bp

Cytosine Count

3402911 bp

Genome Length

9537992 bp

Protein-coding Genes

7790 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine kinaseGa0074812_10743Not AvailableNegative3332519 - 333433663749.1
hypothetical proteinGa0074812_10744Not AvailableNegative3334530 - 333609555587.3
dna ligase dGa0074812_10745Not AvailablePositive3336440 - 333750139872.9
tir domain-containing proteinGa0074812_10746Not AvailablePositive3337601 - 3341104123111.0
aldose 1-epimeraseGa0074812_10747Not AvailableNegative3341157 - 334210133099.1
uncharacterized membrane protein ydfj, mmpl/ssd domainGa0074812_10748Not AvailablePositive3342624 - 334511383854.4
hypothetical proteinGa0074812_10749Not AvailablePositive3345234 - 334645143985.5
hypothetical proteinGa0074812_10750Not AvailablePositive3346707 - 334803245665.4
hypothetical proteinGa0074812_10751Not AvailablePositive3348029 - 334957054188.4
part of aaa domain-containing proteinGa0074812_10752Not AvailablePositive3349567 - 335118656610.1

Displaying genes 2691 – 2700 of 7847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.