MAG TPA_asm: Lactococcus garvieae

Coccifacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Lactococcus

Description

Lactococcus garvieae is a Gram-positive bacterium that exhibits a cocci shape and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. This organism is found in various habitats, including fresh water, marine environments, and fecal matter. Its presence in diverse aquatic ecosystems suggests a significant ecological role, particularly in nutrient cycling and interactions within microbial communities. Lactococcus garvieae has been identified in association with several hosts, including Homo sapiens (humans), Bos taurus (cattle), Oncorhynchus mykiss (rainbow trout), and Seriola quinqueradiata (Japanese amberjack). This broad host range indicates its potential impact on both human health and the aquaculture industry. Notably, it is linked to various health issues, such as lactococcosis and meningoencephalitis, particularly in fish, and warm water lactococcosis in other hosts. Additionally, Lactococcus garvieae possesses flagella, which may contribute to its motility in aquatic environments. The bacterium has a single replicon, indicating a streamlined genetic structure that may be advantageous for its survival in fluctuating environments. Understanding the ecological roles and health implications of Lactococcus garvieae is important, especially given its potential to impact both human and animal health. Its presence in fresh and marine waters, along with its association with various hosts, highlights the need for further research into its ecological interactions and pathogenic potential.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusLactococcus
SpeciesLactococcus garvieae
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of MAG TPA_asm: Lactococcus garvieae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; Marine; stool
Biotic relationshipNot Available
Host(s)Homo sapiens, Bos taurus, Oncorhynchus mykiss
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

MAG TPA_asm: Lactococcus garvieae isolate UBA11300 contig_583,

Gene Summary

Adenine Count

592664 bp

Thymine Count

606234 bp

Guanine Count

365947 bp

Cytosine Count

387864 bp

Genome Length

1952829 bp

Protein-coding Genes

1768 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase large subunitDIW25_00360Not AvailablePositive68061 - 71246116699.0
rrna large subunit pseudouridine synthase eDIW25_00365Not AvailablePositive71338 - 7187120310.8
hypothetical proteinDIW25_00370Not AvailableNegative71900 - 7269729153.1
atp-binding proteinDIW25_00375Not AvailableNegative72694 - 7379441482.8
virion core proteinDIW25_00380Not AvailableNegative73816 - 7504544575.1
dihydroorotate dehydrogenase electron transfer subunitDIW25_00385Not AvailablePositive75464 - 7624928566.9
dihydroorotate dehydrogenaseDIW25_00390Not AvailablePositive76251 - 7718633320.5
orotidine-5'-phosphate decarboxylaseDIW25_00395Not AvailablePositive77179 - 7789826400.9
16s rrna (guanine(527)-n(7))-methyltransferase rsmgDIW25_00400Not AvailableNegative77931 - 7864427283.3
polyprenyl synthetase family proteinDIW25_00405Not AvailableNegative78644 - 7960335920.2

Displaying genes 261 – 270 of 1960 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
LactococcosisCausesPMC12172566
MeningoencephalitisCausesPMC12172566
Warm water lactococcosisCausesPMC12172566

Displaying health effects 1 – 3 of 3 in total