MAG TPA_asm: Anabaena sp. UBA12330

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Anabaena

Description

Anabaena sp. UBA12330, described under the MAG TPA_asm, possesses a single replicon, indicating a streamlined genomic organization typical of many cyanobacterial species. The genomic data for this organism is accessible through the accession number DQEB00000000.1, which allows for further exploration of its genetic composition and potential functional capabilities. Anabaena is a genus known for its ability to perform nitrogen fixation, a crucial ecological process that allows the conversion of atmospheric nitrogen into a form usable by living organisms. This capability is particularly important in aquatic ecosystems where nitrogen availability can limit productivity. The presence of a single replicon may suggest a simpler regulatory mechanism for gene expression, which could facilitate rapid adaptation to changing environmental conditions. The ecological role of Anabaena sp. UBA12330 is likely linked to its interactions within its habitat, particularly in relation to nutrient cycling and its symbiotic relationships with other organisms. Cyanobacteria, including Anabaena, are vital components of many aquatic food webs, serving as primary producers that support various trophic levels. Their ability to fix nitrogen not only enhances their own growth but also contributes to the overall fertility of the ecosystem, promoting biodiversity. Overall, the genomic simplicity of Anabaena sp. UBA12330, combined with its ecological functions, underscores its importance in both nitrogen cycling and as a foundational species in aquatic environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusAnabaena
SpeciesAnabaena sp. UBA12330
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of MAG TPA_asm: Anabaena sp. UBA12330
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Anabaena sp. UBA12330 contig_39, whole genome shotgun

Gene Summary

Adenine Count

1346656 bp

Thymine Count

1344190 bp

Guanine Count

787010 bp

Cytosine Count

792408 bp

Genome Length

4285598 bp

Protein-coding Genes

3676 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-quinone oxidoreductase subunit iDIU28_10180Not AvailablePositive2261609 - 226219322127.8
nadh-quinone oxidoreductase subunit jDIU28_10185Not AvailablePositive2262294 - 226290521768.2
nad(p)h-quinone oxidoreductase subunit 4lDIU28_10190Not AvailablePositive2262946 - 226325111247.1
nad(+) kinaseDIU28_10195Not AvailablePositive2263258 - 226417833862.8
mate family efflux transporterDIU28_10200Not AvailableNegative2264559 - 226590549147.5
hypothetical proteinDIU28_10205Not AvailableNegative2266103 - 22662886751.16
putative glutamate--cysteine ligaseDIU28_10210Not AvailablePositive2266895 - 226803442969.6
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlDIU28_10215Not AvailablePositive2268305 - 226876617207.6
peptigoglycan-binding protein lysmDIU28_10220Not AvailablePositive2269542 - 227185482247.3
Trna-metNot AvailableNot AvailablePositive2271983 - 2272056Not Available

Displaying genes 1921 – 1930 of 3719 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.