MAG TPA_asm: Hyphomonadaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Description

The MAG TPA_asm represents a member of the Hyphomonadaceae family, a group of bacteria known for their diverse ecological roles and unique morphologies. This particular bacterium is characterized by the presence of a single replicon, indicating a streamlined genomic organization, which may be indicative of its evolutionary adaptations or ecological niche. The accession number for this bacterium is DQDY00000000.1, which provides a reference point for genetic and genomic studies. Hyphomonadaceae members are commonly associated with aquatic environments, where they are often found in biofilms and are thought to play crucial roles in nutrient cycling and organic matter degradation. Given its classification within the Hyphomonadaceae family, TPA_asm may contribute to the ecological balance within its habitat by participating in the breakdown of complex organic materials. This function can be particularly significant in environments such as marine ecosystems, where microbial communities are essential for maintaining ecosystem health and resilience. In summary, the Hyphomonadaceae bacterium TPA_asm, with its single replicon and identification through its accession number, exemplifies the important roles that members of this family can play in aquatic environments, highlighting the necessity of understanding microbial diversity for ecosystem management and conservation efforts.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Hyphomonadaceae bacterium isolate UBA12333

Gene Summary

Adenine Count

770731 bp

Thymine Count

769696 bp

Guanine Count

983053 bp

Cytosine Count

985262 bp

Genome Length

3527772 bp

Protein-coding Genes

3272 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xylan 1,4-beta-xylosidaseDIU09_10130Not AvailableNegative2119678 - 212129159456.4
tonb-dependent receptorDIU09_10135Not AvailableNegative2121311 - 2124370112055.0
laci family transcriptional regulatorDIU09_10140Not AvailablePositive2124589 - 212560836663.1
5-dehydro-4-deoxy-d-glucuronate isomeraseDIU09_10145Not AvailablePositive2125735 - 212658331471.6
2-deoxy-d-gluconate 3-dehydrogenaseDIU09_10150Not AvailablePositive2126600 - 212735826116.4
2-keto-3-deoxygluconate kinaseDIU09_10155Not AvailablePositive2127365 - 212836334960.9
carboxylesteraseDIU09_10160Not AvailablePositive2128398 - 212985551758.6
pectate lyaseDIU09_10165Not AvailablePositive2130094 - 213144947782.9
hypothetical proteinDIU09_10170Not AvailableNegative2131438 - 213271843607.5
c4-dicarboxylate abc transporterDIU09_10175Not AvailableNegative2132730 - 213326619417.1

Displaying genes 2011 – 2020 of 3324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.