MAG TPA_asm: Hyphomonadaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Description

The MAG TPA_asm represents a member of the Hyphomonadaceae family, a group of bacteria known for their diverse ecological roles and unique morphologies. This particular bacterium is characterized by the presence of a single replicon, indicating a streamlined genomic organization, which may be indicative of its evolutionary adaptations or ecological niche. The accession number for this bacterium is DQDY00000000.1, which provides a reference point for genetic and genomic studies. Hyphomonadaceae members are commonly associated with aquatic environments, where they are often found in biofilms and are thought to play crucial roles in nutrient cycling and organic matter degradation. Given its classification within the Hyphomonadaceae family, TPA_asm may contribute to the ecological balance within its habitat by participating in the breakdown of complex organic materials. This function can be particularly significant in environments such as marine ecosystems, where microbial communities are essential for maintaining ecosystem health and resilience. In summary, the Hyphomonadaceae bacterium TPA_asm, with its single replicon and identification through its accession number, exemplifies the important roles that members of this family can play in aquatic environments, highlighting the necessity of understanding microbial diversity for ecosystem management and conservation efforts.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Hyphomonadaceae bacterium isolate UBA12333

Gene Summary

Adenine Count

770731 bp

Thymine Count

769696 bp

Guanine Count

983053 bp

Cytosine Count

985262 bp

Genome Length

3527772 bp

Protein-coding Genes

3272 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hishDIU09_10080Not AvailablePositive2112095 - 211271521645.7
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDIU09_10085Not AvailablePositive2112712 - 211343424621.9
imidazole glycerol phosphate synthase subunit hisfDIU09_10090Not AvailablePositive2113431 - 211421327164.4
phosphoribosyl-atp diphosphataseDIU09_10095Not AvailablePositive2114210 - 211454211055.2
gnat family n-acetyltransferaseDIU09_10100Not AvailablePositive2114458 - 211506022575.2
hypothetical proteinDIU09_10105Not AvailableNegative2115071 - 211536110000.6
galactonate dehydrataseDIU09_10110Not AvailableNegative2115362 - 211609125233.8
galactonate dehydrataseDIU09_10115Not AvailableNegative2116213 - 211676519024.8
mannitol dehydrogenaseDIU09_10120Not AvailableNegative2116762 - 211823452882.1
glucuronate isomeraseDIU09_10125Not AvailableNegative2118239 - 211966653957.5

Displaying genes 2001 – 2010 of 3324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.