Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DIC56_04940 | Not Available | Negative | 986415 - 987296 | 32458.2 |
| amidophosphoribosyltransferase | DIC56_04945 | Not Available | Positive | 987358 - 988134 | 27850.9 |
| glutaredoxin 3 | DIC56_04950 | Not Available | Positive | 988194 - 988451 | 9299.02 |
| nitrilase | DIC56_04955 | Not Available | Positive | 988463 - 989320 | 30352.3 |
| duf1178 domain-containing protein | DIC56_04960 | Not Available | Positive | 989317 - 989745 | 15348.2 |
| duf924 domain-containing protein | DIC56_04965 | Not Available | Negative | 989862 - 990413 | 21092.7 |
| bifunctional 3-demethylubiquinol 3-o-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase | DIC56_04970 | Not Available | Negative | 990410 - 991174 | 27833.4 |
| sh3 domain-containing protein | DIC56_04975 | Not Available | Positive | 991401 - 992033 | 24398.9 |
| hypothetical protein | DIC56_04980 | Not Available | Negative | 992114 - 992581 | 17061.4 |
| polyketide cyclase | DIC56_04985 | Not Available | Negative | 992600 - 993088 | 18105.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
