Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | DIC56_04840 | Not Available | Negative | 966870 - 968033 | 40870.5 |
| arac family transcriptional regulator | DIC56_04845 | Not Available | Positive | 968127 - 968984 | 31715.5 |
| branched-chain amino acid abc transporter permease | DIC56_04850 | Not Available | Positive | 969057 - 969761 | 24572.3 |
| hypothetical protein | DIC56_04855 | Not Available | Positive | 969758 - 970060 | 9832.69 |
| replicative dna helicase | DIC56_04860 | Not Available | Negative | 970071 - 971567 | 54884.5 |
| 50s ribosomal protein l9 | DIC56_04865 | Not Available | Negative | 971895 - 972464 | 20792.6 |
| duf2232 domain-containing protein | DIC56_04870 | Not Available | Negative | 972489 - 973460 | 33761.4 |
| 30s ribosomal protein s18 | DIC56_04875 | Not Available | Negative | 973659 - 973907 | 9323.48 |
| 30s ribosomal protein s6 | DIC56_04880 | Not Available | Negative | 973932 - 974387 | 17492.7 |
| hypothetical protein | DIC56_04885 | Not Available | Negative | 974388 - 974729 | 12197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
