Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase | DIC56_04680 | Not Available | Positive | 933697 - 934770 | 39309.4 |
| hypothetical protein | DIC56_04685 | Not Available | Positive | 934780 - 935466 | 25565.4 |
| l-aspartate oxidase | DIC56_04690 | Not Available | Positive | 935450 - 937042 | 56593.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | DIC56_04695 | Not Available | Positive | 937068 - 937976 | 31880.4 |
| nad regulator | DIC56_04700 | Not Available | Negative | 938023 - 939000 | 36268.9 |
| protein tyrosine phosphatase | DIC56_04705 | Not Available | Negative | 938997 - 939533 | 19205.3 |
| hydrolase | DIC56_04710 | Not Available | Negative | 939530 - 940117 | 21495.8 |
| folate-binding protein ygfz | DIC56_04715 | Not Available | Negative | 940163 - 940999 | 29590.6 |
| hypothetical protein | DIC56_04720 | Not Available | Negative | 941143 - 941916 | 27095.2 |
| hypothetical protein | DIC56_04725 | Not Available | Negative | 941938 - 942195 | 9542.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
