Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | DIC56_04580 | Not Available | Negative | 913723 - 915789 | 74393.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DIC56_04585 | Not Available | Positive | 916011 - 916895 | 30883.3 |
| ssra-binding protein | DIC56_04590 | Not Available | Positive | 917050 - 917529 | 18427.2 |
| duf3830 domain-containing protein | DIC56_04595 | Not Available | Positive | 917532 - 917948 | 15376.3 |
| globin-coupled sensor protein | DIC56_04600 | Not Available | Negative | 918090 - 919604 | 54014.7 |
| nyn domain-containing protein | DIC56_04605 | Not Available | Negative | 919930 - 920514 | 22136.4 |
| dna-directed rna polymerase subunit omega | DIC56_04610 | Not Available | Positive | 920809 - 921210 | 14648.0 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DIC56_04615 | Not Available | Positive | 921308 - 923533 | 83599.4 |
| hypothetical protein | DIC56_04620 | Not Available | Positive | 923715 - 924257 | 19130.7 |
| duf3563 domain-containing protein | DIC56_04625 | Not Available | Positive | 924432 - 924584 | 5980.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
