Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein repc | DIC56_04480 | Not Available | Positive | 896918 - 898237 | 48636.1 |
| dna invertase | DIC56_04485 | Not Available | Negative | 898249 - 899148 | 33120.1 |
| vapc toxin family pin domain ribonuclease | DIC56_04490 | Not Available | Negative | 899333 - 899731 | 14069.1 |
| dna-binding protein | DIC56_04495 | Not Available | Negative | 899728 - 899979 | 9026.02 |
| hypothetical protein | DIC56_04500 | Not Available | Positive | 900305 - 901320 | 36788.0 |
| histidine kinase | DIC56_04505 | Not Available | Negative | 901321 - 902368 | 37432.9 |
| dna-binding response regulator | DIC56_04510 | Not Available | Negative | 902368 - 903096 | 27228.0 |
| hypothetical protein | DIC56_04515 | Not Available | Positive | 903518 - 903811 | 10694.2 |
| ku protein | DIC56_04520 | Not Available | Positive | 903898 - 904764 | 31791.2 |
| dna ligase d | DIC56_04525 | Not Available | Positive | 904768 - 907302 | 92714.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
