Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbl | DIC56_04430 | Not Available | Negative | 887177 - 888364 | 40185.5 |
| entry exclusion protein trbk | DIC56_04435 | Not Available | Negative | 888358 - 888576 | 7770.46 |
| p-type conjugative transfer protein trbj | DIC56_04440 | Not Available | Negative | 888573 - 889379 | 29743.0 |
| conjugal transfer protein trbe | DIC56_04445 | Not Available | Negative | 889354 - 891816 | 91876.7 |
| conjugal transfer protein trbd | DIC56_04450 | Not Available | Negative | 891827 - 892126 | 11205.1 |
| conjugal transfer protein trbc | DIC56_04455 | Not Available | Negative | 892119 - 892526 | 13598.7 |
| p-type conjugative transfer atpase trbb | DIC56_04460 | Not Available | Negative | 892516 - 893487 | 34841.8 |
| autoinducer synthesis protein | DIC56_04465 | Not Available | Negative | 893484 - 894122 | 22770.1 |
| plasmid partitioning protein repa | DIC56_04470 | Not Available | Positive | 894483 - 895694 | 45018.0 |
| plasmid partitioning protein repb | DIC56_04475 | Not Available | Positive | 895691 - 896692 | 36128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
