Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenical-resistance protein | DIC56_04265 | Not Available | Negative | 851584 - 852630 | 37419.1 |
| arsr family transcriptional regulator | DIC56_04270 | Not Available | Negative | 852674 - 853168 | 17817.2 |
| transcriptional regulator | DIC56_04275 | Not Available | Negative | 853178 - 853510 | 11832.5 |
| class ii fumarate hydratase | DIC56_04280 | Not Available | Positive | 853672 - 855063 | 49123.6 |
| fumarate hydratase | DIC56_04285 | Not Available | Positive | 855208 - 856815 | 58577.2 |
| ggdef domain-containing protein | DIC56_04290 | Not Available | Positive | 857038 - 858105 | 39767.3 |
| flavin-nucleotide-binding protein | DIC56_04295 | Not Available | Negative | 858128 - 858736 | 22535.9 |
| alpha/beta hydrolase | DIC56_04300 | Not Available | Negative | 858822 - 859730 | 31940.7 |
| marr family transcriptional regulator | DIC56_04305 | Not Available | Positive | 859778 - 860245 | 17862.8 |
| hypothetical protein | DIC56_04310 | Not Available | Negative | 860256 - 860618 | 13331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
