Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | DIC56_04160 | Not Available | Negative | 825979 - 827349 | 48378.0 |
| abc transporter atp-binding protein | DIC56_04165 | Not Available | Negative | 827359 - 828180 | 30220.5 |
| organic solvent abc transporter permease | DIC56_04170 | Not Available | Negative | 828195 - 829343 | 40573.3 |
| udp-2,3-diacylglucosamine hydrolase | DIC56_04175 | Not Available | Negative | 829534 - 830463 | 35379.3 |
| nadp-dependent malic enzyme | DIC56_04180 | Not Available | Positive | 830663 - 832909 | 80719.7 |
| transcriptional regulator | DIC56_04185 | Not Available | Positive | 833063 - 833815 | 27748.2 |
| autoinducer synthase | DIC56_04190 | Not Available | Positive | 833991 - 834638 | 24049.0 |
| hypothetical protein | DIC56_04195 | Not Available | Positive | 834849 - 835916 | 38940.4 |
| 5,6-dimethylbenzimidazole synthase | DIC56_04200 | Not Available | Negative | 835971 - 836660 | 26101.2 |
| hypothetical protein | DIC56_04205 | Not Available | Negative | 836940 - 837782 | 31362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
