Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase family protein | DIC56_03540 | Not Available | Positive | 704469 - 705425 | 34063.8 |
| atp-dependent helicase hrpb | DIC56_03545 | Not Available | Positive | 705422 - 707890 | 88626.3 |
| two-component sensor histidine kinase | DIC56_03550 | Not Available | Positive | 707917 - 709221 | 47634.4 |
| two-component system response regulator | DIC56_03555 | Not Available | Positive | 709296 - 709892 | 21775.8 |
| dna repair protein mmcb-related protein | DIC56_03560 | Not Available | Negative | 709899 - 710387 | 18272.0 |
| l,d-transpeptidase | DIC56_03565 | Not Available | Positive | 710566 - 711225 | 24239.0 |
| malate synthase g | DIC56_03570 | Not Available | Negative | 711299 - 711590 | 10700.8 |
| two-component sensor histidine kinase | DIC56_03575 | Not Available | Positive | 711591 - 712534 | 34288.8 |
| metal-binding protein | DIC56_03580 | Not Available | Positive | 712651 - 713094 | 15450.7 |
| peptidase | DIC56_03590 | Not Available | Negative | 713857 - 714886 | 36488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
