Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein | DIC56_03490 | Not Available | Positive | 697366 - 697692 | 11413.2 |
| lysine transporter lyse | DIC56_03495 | Not Available | Negative | 697826 - 698458 | 21426.8 |
| lrp/asnc family transcriptional regulator | DIC56_03500 | Not Available | Negative | 698455 - 698910 | 16762.2 |
| fe-s cluster assembly scaffold sufa | DIC56_03505 | Not Available | Negative | 699077 - 699466 | 13588.1 |
| suf system fe-s cluster assembly protein | DIC56_03510 | Not Available | Negative | 699543 - 699923 | 13894.5 |
| cysteine desulfurase | DIC56_03515 | Not Available | Negative | 699934 - 701178 | 45491.1 |
| fe-s cluster assembly protein sufd | DIC56_03520 | Not Available | Negative | 701171 - 702499 | 47273.1 |
| fe-s cluster assembly atpase sufc | DIC56_03525 | Not Available | Negative | 702471 - 703226 | 27423.2 |
| excinuclease abc subunit c | DIC56_03530 | Not Available | Negative | 703341 - 703682 | 13740.5 |
| fe-s cluster assembly protein sufb | DIC56_03535 | Not Available | Negative | 703772 - 704229 | 16338.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
