Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin hipa | DIC56_00125 | Not Available | Negative | 22792 - 24108 | 48303.5 |
| xre family transcriptional regulator | DIC56_00130 | Not Available | Negative | 24105 - 24479 | 14045.6 |
| is21 family transposase | DIC56_00135 | Not Available | Positive | 24941 - 26437 | 56970.2 |
| aaa family atpase | DIC56_00140 | Not Available | Positive | 26434 - 27204 | 28900.2 |
| abc transporter substrate-binding protein | DIC56_00145 | Not Available | Positive | 27426 - 27811 | 14452.7 |
| peptide abc transporter permease | DIC56_00150 | Not Available | Positive | 27881 - 28885 | 36939.9 |
| d,d-dipeptide abc transporter permease | DIC56_00155 | Not Available | Positive | 28897 - 29817 | 32934.1 |
| peptide abc transporter atp-binding protein | DIC56_00160 | Not Available | Positive | 29814 - 30650 | 30694.6 |
| abc transporter atp-binding protein | DIC56_00165 | Not Available | Positive | 30647 - 31396 | 27623.1 |
| phosphonate metabolism protein phnm | DIC56_00170 | Not Available | Negative | 31403 - 32581 | 42458.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
