Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DIC56_03135 | Not Available | Negative | 633158 - 633865 | 25693.7 |
| hydantoin racemase | DIC56_03140 | Not Available | Positive | 634058 - 634717 | 23007.9 |
| dihydroorotase | DIC56_03145 | Not Available | Positive | 634714 - 636093 | 49603.6 |
| voc family protein | DIC56_03150 | Not Available | Positive | 636090 - 636485 | 14908.8 |
| abc transporter substrate-binding protein | DIC56_03155 | Not Available | Positive | 636532 - 638100 | 58060.4 |
| abc transporter permease | DIC56_03160 | Not Available | Positive | 638182 - 638385 | 7791.98 |
| dna-directed rna polymerase subunit alpha | DIC56_03165 | Not Available | Positive | 638386 - 638568 | 6887.27 |
| 50s ribosomal protein l17 | DIC56_03170 | Not Available | Positive | 638614 - 639036 | 15480.8 |
| rna polymerase subunit sigma-24 | DIC56_03175 | Not Available | Negative | 639113 - 640384 | 46002.5 |
| lactoylglutathione lyase | DIC56_03180 | Not Available | Negative | 640434 - 640856 | 15286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
